The Problem with Notes
For years, my notes were digital landfills. Google Docs full of half-finished thoughts. Notion databases I set up once and never opened again. OneNote notebooks where ideas went to die.
The problem wasn’t discipline — it was architecture. Traditional note-taking apps treat notes as isolated documents. But ideas don’t exist in isolation. They connect, contradict, and compound.
Enter Obsidian
Obsidian is a markdown-based note-taking app that stores everything locally as plain .md files. No cloud lock-in. No proprietary format. Just text files in a folder.
But the magic isn’t the format — it’s the linking.
The Double-Bracket Revolution
In Obsidian, you link notes with [[double brackets]]. Write a note about “Binary Trees” and mention “Recursion”? Link it: [[Recursion]]. Now those two notes are connected. Over time, your vault becomes a network — a graph of interconnected knowledge.
The Graph View
Obsidian visualizes your links as an interactive graph. After a semester of notes, mine looks like a neural network. Clusters form around subjects. Bridge notes connect disciplines. You can literally see how your knowledge is structured.
My System
I use a modified Zettelkasten method:
- Fleeting notes: Quick captures during lectures or while reading. Raw, unpolished.
- Literature notes: Summaries of source material in my own words. One note per source.
- Permanent notes: Atomic ideas — one concept per note, written as if explaining to someone else.
- Maps of Content (MOCs): Index notes that curate links to related permanent notes. My “Discrete Math MOC” links to ~40 notes.
Daily Notes
Every day gets a note. It’s timestamped, and I dump everything into it — tasks, thoughts, lecture highlights, random ideas. At the end of the week, I process the fleeting notes into permanent ones.
## 2026-02-05
- Lecture: Graph theory — Euler paths vs Hamilton paths
- [[Euler Path]] requires all edges visited once
- [[Hamiltonian Path]] requires all vertices visited once
- Connection to [[Travelling Salesman Problem]]?
- Idea: Blog post about why note-taking is underrated
- TODO: Review [[Binary Search Trees]] before quiz
Why Not Notion?
Notion is powerful, but it’s a database tool, not a thinking tool. Its strength is structure. Obsidian’s strength is emergence — patterns you didn’t plan for surface naturally through linking.
Also, Notion requires internet. Obsidian works offline, starts instantly, and will never put my notes behind a paywall.
The Takeaway
Your notes aren’t a record of what you learned. They’re a tool for thinking. The act of linking, restructuring, and revisiting notes is where understanding happens.
Your second brain is only as good as the connections you build.